Issues

• signal_fraction is biased upward by trial count and masked epoch tails

  bugprocessing
  DuguidLab/mesoscopy#181 · Filter by author celefthe opened on Sep 30, 2026

• DtypeWarning on mixed-type trials columns when reading peri-event CSVs

  bugprocessing
  DuguidLab/mesoscopy#180 · Filter by author celefthe opened on Sep 30, 2026

• Generalise reliability metrics beyond go/no-go

  enhancementprocessing
  DuguidLab/mesoscopy#175 · Filter by author celefthe opened on Sep 29, 2026

• Shuffle null for session reliability metrics

  enhancementprocessing
  DuguidLab/mesoscopy#174 · Filter by author celefthe opened on Sep 29, 2026

• Peri-event report for HDF5 input

  enhancementutils
  DuguidLab/mesoscopy#163 · Filter by author celefthe opened on Sep 18, 2026

• peri-event HDF5 output should include trial information

  enhancementutils
  DuguidLab/mesoscopy#159 · Filter by author celefthe opened on Sep 18, 2026

• process metrics support HDF5 peri-event input with per-pixel metric maps

  enhancementprocessing
  DuguidLab/mesoscopy#153 · Filter by author celefthe opened on Sep 18, 2026
  1

• process peri-event: trials path is read as CSV without validation

  bugprocessing
  DuguidLab/mesoscopy#150 · Filter by author celefthe opened on Sep 17, 2026

• Preprocessing nukes itself if interim is same as output

  bugpreprocessing
  DuguidLab/mesoscopy#135 · Filter by author celefthe opened on Sep 14, 2026

• Print behaviour alignment in inspect

  enhancementutils
  DuguidLab/mesoscopy#130 · Filter by author celefthe opened on Sep 14, 2026

• Carry behaviour alignment into NWB files

  enhancementutils
  DuguidLab/mesoscopy#129 · Filter by author celefthe opened on Sep 14, 2026

• nan_to_num in process.regression leaves inf as 1.8e308

  bugprocessing
  DuguidLab/mesoscopy#122 · Filter by author celefthe opened on Sep 10, 2026

• convert video stores frames as int8, clipping every value above 127

  bug
  DuguidLab/mesoscopy#118 · Filter by author celefthe opened on Sep 10, 2026

• Option to mask regression by ABA area

  processing
  DuguidLab/mesoscopy#112 · Filter by author celefthe opened on Aug 13, 2026
  

• Add decoding to processing module

  enhancementprocessing
  DuguidLab/mesoscopy#107 · Filter by author celefthe opened on Aug 12, 2026
  

• check command to return auto-qa results

  enhancementutils
  Feature

  DuguidLab/mesoscopy#85 · Filter by author celefthe opened on Jan 19, 2026

• Add auto QA check for registration step

  enhancementregistration
  Feature

  DuguidLab/mesoscopy#81 · Filter by author celefthe opened on Jan 15, 2026

• Document running mesoscopy on HPC clusters

  documentation
  Task

  DuguidLab/mesoscopy#76 · Filter by author celefthe opened on Aug 15, 2025
  

• Add demo notebooks for using mesoscopy as a library

  documentation
  Task

  DuguidLab/mesoscopy#52 · Filter by author celefthe opened on May 15, 2025
  

• mesoscopy commands to accept a params file

  enhancementpreprocessingprocessingregistration
  Feature

  DuguidLab/mesoscopy#37 · Filter by author celefthe opened on Oct 8, 2024
  

• Replace click.echo calls with logging

  enhancementpreprocessingprocessingregistration
  Feature

  DuguidLab/mesoscopy#32 · Filter by author celefthe opened on Oct 3, 2024
  

• Document typical workflow

  documentation
  Task

  DuguidLab/mesoscopy#22 · Filter by author celefthe opened on Oct 10, 2023
  

• SnakeMake integration

  enhancement
  Feature

  DuguidLab/mesoscopy#20 · Filter by author celefthe opened on Oct 10, 2023
  1