python-publish.yml

name: Publish Python 🐍 distribution 📦 to PyPI

on:
  workflow_dispatch:
  push:
    branches:
      - main

jobs:
  publish:
    runs-on: ubuntu-latest

    steps:
      - name: Checkout code
        uses: actions/checkout@v2

      - name: Set up Python
        uses: actions/setup-python@v2
        with:
          python-version: '3.12'  # pinned: very new Python versions (e.g. 3.14)
                                   # often have no prebuilt rpy2/rpy2-rinterface
                                   # wheels yet, forcing a from-source build

      - name: Install dependencies
        run: |
          python3 -m pip install --upgrade pip
          pip install wheel setuptools twine

      - name: Build distribution
        run: python setup.py sdist bdist_wheel

      - name: Set up R
        uses: r-lib/actions/setup-r@v2
        with:
          r-version: '4.4'

      - name: Run examples
        run: pip install .&&find examples -maxdepth 2 -name "*.py" -exec  python3 {} \;

      - name: Publish to PyPI
        uses: pypa/gh-action-pypi-publish@release/v1
        with:
          password: ${{ secrets.PYPI_GLOBAL2 }}
          repository-url: https://upload.pypi.org/legacy/