build(many):CPDT-291 remove python 3.10 (EoL)

.github/workflows/cogstack-es_main.yml

@@ -22,7 +22,7 @@ jobs:
       contents: read
     strategy:
       matrix:
-        python-version: [ '3.10', '3.11', '3.12', '3.13' ]
+        python-version: [ '3.11', '3.12', '3.13' ]
       max-parallel: 4
 
     steps:
@@ -46,7 +46,7 @@ jobs:
       contents: read
     strategy:
       matrix:
-        python-version: [ '3.10', '3.11', '3.12', '3.13' ]
+        python-version: [ '3.11', '3.12', '3.13' ]
         install-target: [ "ES9", "ES8", "OS", ]
       max-parallel: 4
 
@@ -80,7 +80,7 @@ jobs:
       - name: Set up Python
         uses: actions/setup-python@v7
         with:
-          python-version: '3.10'
+          python-version: '3.11'
 
       - name: Install dependencies
         run: |
@@ -104,4 +104,4 @@ jobs:
         uses: pypa/gh-action-pypi-publish@release/v1
         with:
           repository_url: https://test.pypi.org/legacy/
-          packages_dir: cogstack-es/dist
+          packages_dir: cogstack-es/dist

.github/workflows/cogstack-es_release.yml

@@ -26,7 +26,7 @@ jobs:
       - name: Set up Python
         uses: actions/setup-python@v7
         with:
-          python-version: '3.10'
+          python-version: '3.11'
 
       - name: Install dependencies
         run: |

.github/workflows/medcat-den_main.yml

@@ -20,7 +20,7 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: [ '3.10', '3.11', '3.12' ]
+        python-version: [ '3.11', '3.12' ]
       max-parallel: 4
     steps:
       - uses: actions/checkout@v7
@@ -58,7 +58,7 @@ jobs:
       - name: Set up Python
         uses: actions/setup-python@v7
         with:
-          python-version: '3.10'
+          python-version: '3.11'
 
       - name: Install dependencies
         run: |

.github/workflows/medcat-den_release.yml

@@ -26,7 +26,7 @@ jobs:
       - name: Set up Python
         uses: actions/setup-python@v7
         with:
-          python-version: '3.10'
+          python-version: '3.11'
 
       - name: Install dependencies
         run: |

.github/workflows/medcat-embedding-linker_ci.yml

@@ -22,7 +22,7 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: [ '3.10', '3.11', '3.12' ]
+        python-version: [ '3.11', '3.12' ]
       max-parallel: 4
     steps:
       - uses: actions/checkout@v7
@@ -57,10 +57,10 @@ jobs:
           fetch-depth: 0        # fetch all history
           fetch-tags: true      # fetch tags explicitly
 
-      - name: Install uv for Python 3.10
+      - name: Install uv for Python 3.11
         uses: astral-sh/setup-uv@v7
         with:
-          python-version: '3.10'
+          python-version: '3.11'
           enable-cache: true
 
       - name: Install dependencies
@@ -90,10 +90,10 @@ jobs:
       - name: Checkout main
         uses: actions/checkout@v7
 
-      - name: Install uv for Python 3.10
+      - name: Install uv for Python 3.11
         uses: astral-sh/setup-uv@v7
         with:
-          python-version: '3.10'
+          python-version: '3.11'
           enable-cache: true
 
       - name: Install dependencies

.github/workflows/medcat-gliner_ci.yml

@@ -27,7 +27,7 @@ jobs:
     timeout-minutes: 30
     strategy:
       matrix:
-        python-version: [ '3.10', '3.11', '3.12', '3.13' ]
+        python-version: [ '3.11', '3.12', '3.13' ]
       max-parallel: 4
 
     steps:
@@ -68,10 +68,10 @@ jobs:
           fetch-depth: 0        # fetch all history
           fetch-tags: true      # fetch tags explicitly
 
-      - name: Install uv for Python 3.10
+      - name: Install uv for Python 3.11
         uses: astral-sh/setup-uv@v7
         with:
-          python-version: '3.10'
+          python-version: '3.11'
           enable-cache: true
 
       - name: Set timestamp-based dev version
@@ -101,10 +101,10 @@ jobs:
       - name: Checkout main
         uses: actions/checkout@v7
 
-      - name: Install uv for Python 3.10
+      - name: Install uv for Python 3.11
         uses: astral-sh/setup-uv@v7
         with:
-          python-version: '3.10'
+          python-version: '3.11'
           enable-cache: true
 
       - name: Install dependencies

.github/workflows/medcat-llm-components_ci.yml

@@ -22,7 +22,7 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: [ '3.10', '3.11', '3.12' ]
+        python-version: [ '3.11', '3.12' ]
       max-parallel: 4
     steps:
       - uses: actions/checkout@v7
@@ -57,10 +57,10 @@ jobs:
           fetch-depth: 0        # fetch all history
           fetch-tags: true      # fetch tags explicitly
 
-      - name: Install uv for Python 3.10
+      - name: Install uv for Python 3.11
         uses: astral-sh/setup-uv@v7
         with:
-          python-version: '3.10'
+          python-version: '3.11'
           enable-cache: true
 
       - name: Install dependencies
@@ -90,10 +90,10 @@ jobs:
       - name: Checkout main
         uses: actions/checkout@v7
 
-      - name: Install uv for Python 3.10
+      - name: Install uv for Python 3.11
         uses: astral-sh/setup-uv@v7
         with:
-          python-version: '3.10'
+          python-version: '3.11'
           enable-cache: true
 
       - name: Install dependencies

.github/workflows/medcat-performance-estimator_ci.yml

@@ -22,7 +22,7 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: [ '3.10', '3.11', '3.12' ]
+        python-version: [ '3.11', '3.12' ]
       max-parallel: 4
     steps:
       - uses: actions/checkout@v7
@@ -57,10 +57,10 @@ jobs:
           fetch-depth: 0        # fetch all history
           fetch-tags: true      # fetch tags explicitly
 
-      - name: Install uv for Python 3.10
+      - name: Install uv for Python 3.11
         uses: astral-sh/setup-uv@v7
         with:
-          python-version: '3.10'
+          python-version: '3.11'
           enable-cache: true
 
       - name: Install dependencies
@@ -90,10 +90,10 @@ jobs:
       - name: Checkout main
         uses: actions/checkout@v7
 
-      - name: Install uv for Python 3.10
+      - name: Install uv for Python 3.11
         uses: astral-sh/setup-uv@v7
         with:
-          python-version: '3.10'
+          python-version: '3.11'
           enable-cache: true
 
       - name: Install dependencies

.github/workflows/medcat-scripts_main.yml

@@ -19,7 +19,7 @@ jobs:
       contents: read
     strategy:
       matrix:
-        python-version: [ '3.10', '3.11', '3.12', '3.13' ]
+        python-version: [ '3.11', '3.12', '3.13' ]
       max-parallel: 4
     steps:
       - uses: actions/checkout@v7

.github/workflows/medcat-trainer_ci.yml

@@ -30,7 +30,7 @@ jobs:
       - name: Set up Python
         uses: actions/setup-python@v7
         with:
-          python-version: "3.10"
+          python-version: "3.11"
 
       - name: Install dependencies
         run: |

.github/workflows/medcat-transformer-ner-ci.yml

@@ -22,7 +22,7 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: [ '3.10', '3.11', '3.12' ]
+        python-version: [ '3.11', '3.12' ]
       max-parallel: 4
     steps:
       - uses: actions/checkout@v7
@@ -57,10 +57,10 @@ jobs:
           fetch-depth: 0        # fetch all history
           fetch-tags: true      # fetch tags explicitly
 
-      - name: Install uv for Python 3.10
+      - name: Install uv for Python 3.11
         uses: astral-sh/setup-uv@v7
         with:
-          python-version: '3.10'
+          python-version: '3.11'
           enable-cache: true
 
       - name: Install dependencies
@@ -90,10 +90,10 @@ jobs:
       - name: Checkout main
         uses: actions/checkout@v7
 
-      - name: Install uv for Python 3.10
+      - name: Install uv for Python 3.11
         uses: astral-sh/setup-uv@v7
         with:
-          python-version: '3.10'
+          python-version: '3.11'
           enable-cache: true
 
       - name: Install dependencies

.github/workflows/medcat-v1_main.yml

@@ -16,7 +16,7 @@ jobs:
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: [ '3.10', '3.11', '3.12' ]
+        python-version: [ '3.11', '3.12' ]
       max-parallel: 4
 
     steps:
@@ -107,10 +107,10 @@ jobs:
           ref: 'main'
           fetch-depth: 0
 
-      - name: Set up Python 3.10
+      - name: Set up Python 3.11
         uses: actions/setup-python@v7
         with:
-          python-version: "3.10"
+          python-version: "3.11"
 
       - name: Install pypa/build
         run: >-

.github/workflows/medcat-v1_production.yml

@@ -29,10 +29,10 @@ jobs:
           ref: ${{ github.event.release.target_commitish }}
           fetch-depth: 0
 
-      - name: Set up Python 3.10
+      - name: Set up Python 3.11
         uses: actions/setup-python@v7
         with:
-          python-version: "3.10"
+          python-version: "3.11"
 
       - name: Run UATs
         run: |

cogstack-es/pyproject.toml

@@ -9,13 +9,12 @@ description = "ElasticSearch or OpenSearch wrapper for CogStack deployments"
 readme = "ReadMe.md"
 authors = [{ name = "Mart Ratas", email = "mart.ratas@kcl.ac.uk" }]
 license = { text = "Apache-2.0" }
-requires-python = ">=3.10"
+requires-python = ">=3.11"
 classifiers = [
     "Development Status :: 3 - Alpha",
     "Intended Audience :: Science/Research",
     "Topic :: Scientific/Engineering :: Artificial Intelligence",
     "Programming Language :: Python :: 3",
-    "Programming Language :: Python :: 3.10",
     "Programming Language :: Python :: 3.11",
     "Programming Language :: Python :: 3.12",
     "Programming Language :: Python :: 3.13",

medcat-addons/gliner/pyproject.toml

@@ -0,0 +1,61 @@
+[build-system]
+requires = ["setuptools>=61.0", "wheel",  "setuptools_scm>=8"]
+build-backend = "setuptools.build_meta"
+
+[project]
+name = "medcat_gliner"
+dynamic = ["version"]
+description = ""
+readme = "README.md"
+license = { text = "Apache-2.0" }
+authors = [
+    { name="Mart Ratas", email="mart.ratas@kcl.ac.uk" }
+]
+requires-python = ">=3.11"
+
+keywords = ["NLP", "NER", "medical", "MedCAT", "gliner"]
+
+classifiers = [
+    "Development Status :: 3 - Alpha",
+    "Intended Audience :: Science/Research",
+    "Topic :: Scientific/Engineering :: Artificial Intelligence",
+    "Programming Language :: Python :: 3",
+    "Programming Language :: Python :: 3.11",
+    "Programming Language :: Python :: 3.12",
+    "Programming Language :: Python :: 3.13",
+    "License :: OSI Approved :: Apache Software License"
+]
+
+dependencies = [
+    "medcat",
+]
+
+[project.optional-dependencies]
+dev = [
+    "ruff",
+    "mypy",
+]
+
+# entry-points to add onto medcat
+[project.entry-points."medcat.addons"]
+ner_gliner = "medcat_gliner"
+
+[project.urls]
+Homepage = "https://github.com/CogStack/medcat-ops/tree/main/medcat-gliner"
+Repository = "https://github.com/CogStack/medcat-ops/tree/main/medcat-gliner"
+Issues = "https://github.com/CogStack/medcat-ops/issues"
+
+[tool.setuptools_scm]
+root = ".."
+tag_regex = "^medcat-gliner/v(?P<version>[0-9]+(?:\\.[0-9]+)*)$"
+version_scheme = "guess-next-dev"
+local_scheme = "no-local-version"
+
+[tool.setuptools]
+packages = ["my_addon"]
+
+[tool.setuptools.packages.find]
+where = ["src"]
+
+[tool.setuptools.package-data]
+"medcat_gliner" = ["py.typed"]

medcat-den/pyproject.toml

@@ -11,7 +11,7 @@ license = { text = "Apache-2.0" }
 authors = [
     { name="Mart Ratas", email="mart.ratas@kcl.ac.uk" }
 ]
-requires-python = ">=3.10"
+requires-python = ">=3.11"
 
 keywords = ["NLP", "medical", "MedCAT", "model-registry"]
 
@@ -20,7 +20,6 @@ classifiers = [
     "Intended Audience :: Science/Research",
     "Topic :: Scientific/Engineering :: Artificial Intelligence",
     "Programming Language :: Python :: 3",
-    "Programming Language :: Python :: 3.10",
     "Programming Language :: Python :: 3.11",
     "Programming Language :: Python :: 3.12",
     "License :: OSI Approved :: Apache Software License"