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@GenSpectrum

GenSpectrum

Open web APIs and dashboards for genomic epidemiology
README.md

GenSpectrum

Contributors ✨

Our current core team:

Chaoran Chen
Chaoran Chen 		Taepper
Alexander Taepper 		Fabian Engelniederhammer
Fabian Engelniederhammer
fhennig
Felix Hennig 		tanja819
Tanja stadler

All contributors (emoji key):

Sarah Nadeau
Sarah Nadeau
🤔 🔣 💻		 Michael Yared
Michael Yared
💻		 Philippe Voinov
Philippe Voinov
💻		 ningxie
ningxie
💻		 Cornelius Roemer
Cornelius Roemer
🤔		 DrYak
DrYak
🔣		 gautier-collab
gautier-collab
💻
David Meyer
David Meyer
💻		 Anastasia Escher
Anastasia Escher
💻		 Theo Sanderson
Theo Sanderson
💻 🤔		 Adrian Lison
Adrian Lison
💻		 Jonas Zarzalis
Jonas Zarzalis
💻		 Philip Schulz
Philip Schulz
💻		 GeorgKreuzmayr
GeorgKreuzmayr
💻 🔬
Daniel Grittner
Daniel Grittner
💻 🔬		 David Gichev
David Gichev
💻 🔬		 dr-david
dr-david
🔣 🔬		 Gordon J. Koehn
Gordon J. Koehn
💻		 mcarrara
mcarrara
🔣		 Christian Jaeger
Christian Jaeger
💻		 Anna Parker
Anna Parker
💻

This project follows the all-contributors specification. Contributions of any kind welcome!

Pinned Loading

  1. dashboards dashboards Public

    TypeScript 7

  2. cov-spectrum-website cov-spectrum-website Public

    A web platform to detect and analyze variants of SARS-CoV-2

    TypeScript 60 15

  3. LAPIS LAPIS Public

    An API, a query engine, and a database schema for genomic sequences; currently with a focus on SARS-CoV-2

    Kotlin 33 7

  4. dashboard-components dashboard-components Public

    TypeScript 4

Repositories

Showing 10 of 30 repositories
  • LAPIS Public

    An API, a query engine, and a database schema for genomic sequences; currently with a focus on SARS-CoV-2

    GenSpectrum/LAPIS's past year of commit activity
    Kotlin 33 AGPL-3.0 7 70 9 Updated Oct 28, 2026
  • wasap-dashboard Public
    GenSpectrum/wasap-dashboard's past year of commit activity
    TypeScript 0 AGPL-3.0 0 28 3 Updated Oct 28, 2026
  • influenza-override-groups Public

    This directory creates a JSON that contains the mapping of Influenza genbank assemblies to segment accessions

    GenSpectrum/influenza-override-groups's past year of commit activity
    Python 0 0 6 2 Updated Oct 28, 2026
  • dashboard-components Public
    GenSpectrum/dashboard-components's past year of commit activity
    TypeScript 4 AGPL-3.0 0 67 5 Updated Oct 26, 2026
  • RhyDB-monitor Public
    GenSpectrum/RhyDB-monitor's past year of commit activity
    TypeScript 0 AGPL-3.0 0 0 5 Updated Oct 21, 2026
  • cov-spectrum-website Public

    A web platform to detect and analyze variants of SARS-CoV-2

    GenSpectrum/cov-spectrum-website's past year of commit activity
    TypeScript 60 GPL-3.0 15 84 23 Updated Oct 12, 2026
  • dashboards Public
    GenSpectrum/dashboards's past year of commit activity
    TypeScript 7 AGPL-3.0 0 105 19 Updated Oct 9, 2026
  • silo-console Public
    GenSpectrum/silo-console's past year of commit activity
    HTML 0 0 0 0 Updated Sep 29, 2026
  • loculus-config Public
    GenSpectrum/loculus-config's past year of commit activity
    Shell 0 0 0 0 Updated Jul 30, 2026
  • nextclade-datasets Public
    GenSpectrum/nextclade-datasets's past year of commit activity
    Python 0 0 0 0 Updated May 16, 2026
View all repositories