Issues

• MongoDB driver: gopkg.in/mgo.v2 cannot connect to MongoDB 5.1+

  MG-RAST/Shock#414 · Filter by author wilke opened on Aug 6, 2026

• Modernize client libraries (Python 3, JS/Node, Go module)

  MG-RAST/Shock#409 · Filter by author wilke opened on Feb 26, 2026

• Clean up outdated GitHub wiki pages

  MG-RAST/Shock#408 · Filter by author wilke opened on Feb 26, 2026

• Add test coverage for packages with no test files

  MG-RAST/Shock#406 · Filter by author wilke opened on Feb 26, 2026

• Fix remaining go vet warnings (oauth struct tag, unreachable code)

  MG-RAST/Shock#405 · Filter by author wilke opened on Feb 26, 2026

• Fix QueueUpload race condition: upload queued before node is persisted

  MG-RAST/Shock#404 · Filter by author wilke opened on Feb 26, 2026

• Refactor anonymize.Reader: remove test-specific logic and fix race conditions

  MG-RAST/Shock#403 · Filter by author wilke opened on Feb 26, 2026

• Unused configuration fields in LocationConfig

  MG-RAST/Shock#401 · Filter by author wilke opened on Feb 25, 2026

• Nodes without MD5 checksum cannot be downloaded from remote locations

  MG-RAST/Shock#400 · Filter by author wilke opened on Feb 25, 2026

• No validation of LocationConfig fields

  MG-RAST/Shock#399 · Filter by author wilke opened on Feb 25, 2026

• Location PUT/DELETE operations are commented out

  MG-RAST/Shock#398 · Filter by author wilke opened on Feb 25, 2026

• Glacier storage backend: configuration exists but no implementation

  MG-RAST/Shock#397 · Filter by author wilke opened on Feb 25, 2026

• iRODS download implementation is commented out

  MG-RAST/Shock#396 · Filter by author wilke opened on Feb 25, 2026

• DAOS download backend is a non-functional stub

  MG-RAST/Shock#395 · Filter by author wilke opened on Feb 25, 2026

• S3Download: Index file download code is unreachable

  MG-RAST/Shock#394 · Filter by author wilke opened on Feb 25, 2026

• Bug: Boolean vs string comparison in location stored query

  MG-RAST/Shock#393 · Filter by author wilke opened on Feb 25, 2026

• Bug: Hardcoded location ID 'anltsm' in location query

  MG-RAST/Shock#392 · Filter by author wilke opened on Feb 25, 2026

• Location system: No server-side upload implementation for remote storage backends

  MG-RAST/Shock#391 · Filter by author wilke opened on Feb 25, 2026

• FASTQ file ingestion fails with long reads

  MG-RAST/Shock#388 · Filter by author wltrimbl opened on Mar 8, 2021
  1

• backup nodes

  feature request
  MG-RAST/Shock#377 · Filter by author wgerlach opened on Sep 11, 2019
  2