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@MaayanLab

Ma'ayan Lab

Developing Computational Methods to Study the Complexity of Regulatory Networks in Mammalian Cells

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  1. appyter appyter Public

    jinja2-enabled jupyter notebooks

    Python 37 6

  2. appyter-catalog appyter-catalog Public

    A catalog of appyter notebooks

    Jupyter Notebook 42 51

  3. archs4 archs4 Public

    ARCHS4 RNA-seq processing scripts and web server pages.

    JavaScript 64 11

Repositories

Showing 10 of 396 repositories
  • DRC-Portals Public

    This repo has the code for the CFDE Workbench. The workbench serves the CFDE Information Portal and the CFDE Data Portal

    MaayanLab/DRC-Portals's past year of commit activity
    TypeScript 1 0 9 3 Updated Oct 9, 2026
  • cfde-wheel Public

    Documentation for CFDE Navigation Wheel

    MaayanLab/cfde-wheel's past year of commit activity
    TypeScript 1 2 0 0 Updated Oct 9, 2026
  • cfde-c2m2 Public

    A collection of utilities for simplifying the C2M2 submission process.

    MaayanLab/cfde-c2m2's past year of commit activity
    Python 3 1 3 0 Updated Oct 9, 2026
  • Playbook-Workflow-Builder Public

    A repository for the Playbook Workflow Builder project.

    MaayanLab/Playbook-Workflow-Builder's past year of commit activity
    TypeScript 28 CC-BY-4.0 19 44 (1 issue needs help) 0 Updated Oct 8, 2026
  • rummageo Public Forked from MaayanLab/rummagene
    MaayanLab/rummageo's past year of commit activity
    Jupyter Notebook 6 BSD-3-Clause 5 1 0 Updated Oct 5, 2026
  • blitzgsea Public

    Fast Gene Set Enrichment Analysis (GSEA) implementation of the prerank algorithm. Use Loess interpolation of bimodal ES distribution for accurate p-value estimation.

    MaayanLab/blitzgsea's past year of commit activity
    Jupyter Notebook 69 Apache-2.0 12 0 0 Updated Oct 2, 2026
  • gsfm-predictions Public
    MaayanLab/gsfm-predictions's past year of commit activity
    TypeScript 2 BSD-3-Clause 0 2 0 Updated Oct 1, 2026
  • KidsFirst-KG-UI Public Forked from MaayanLab/Knowledge-Graph-UI

    Knowledge-Graph-UI (KG-UI) is an open-source web-based user interface built for KGs stored in Neo4j. The UI features Cypher queries for viewing immediate neighbors as well as shortest paths between two entities. Additionally, the API can be extended to add other functions such as enrichment analysis, and specialized queries. Example implementation:

    MaayanLab/KidsFirst-KG-UI's past year of commit activity
    TypeScript 0 20 0 0 Updated Sep 30, 2026
  • rummagene Public
    MaayanLab/rummagene's past year of commit activity
    Python 14 5 9 0 Updated Sep 24, 2026
  • drc-static Public
    MaayanLab/drc-static's past year of commit activity
    Jupyter Notebook 0 0 1 1 Updated Sep 8, 2026
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