Issues

• CI broken — actions/upload-artifact@v3 / download-artifact@v3 are deprecated

  jeffdaily/parasail-python#82 · Filter by author colinbjohnson opened on Aug 23, 2026

• Publish manylinux_aarch64 wheels

  jeffdaily/parasail-python#80 · Filter by author colinbjohnson opened on Aug 23, 2026

• Modifying a substitution matrix by column raises an error

  jeffdaily/parasail-python#79 · Filter by author davidnewman02 opened on Nov 12, 2025
  1

• how to out put all location of local alignment

  enhancement
  jeffdaily/parasail-python#75 · Filter by author yipukangda opened on Jun 24, 2024
  4

• Failed to build parasail>=1.1.12 on M1 Mac

  jeffdaily/parasail-python#74 · Filter by author MasaakiU opened on Dec 28, 2023
  2

• How to use the traceback for alignment visualization?

  enhancement
  jeffdaily/parasail-python#73 · Filter by author goodez opened on Oct 13, 2023
  1

• Bioconda recipe for macosx-arm64?

  jeffdaily/parasail-python#72 · Filter by author a-munoz-rojas opened on Aug 21, 2023
  9

• parasail_memalign: posix_memalign failed: Cannot allocate memory

  jeffdaily/parasail-python#70 · Filter by author silenus092 opened on Mar 20, 2023
  4

• PSSM support in Python

  jeffdaily/parasail-python#69 · Filter by author shenker opened on Mar 7, 2023
  2

• Use of threads in library.

  jeffdaily/parasail-python#68 · Filter by author kako-f opened on Dec 30, 2022
  3

• prevent premature deletion

  jeffdaily/parasail-python#64 · Filter by author maxbachmann opened on Aug 23, 2022
  2

• Cigar returns unmatches as leading deletions

  jeffdaily/parasail-python#61 · Filter by author cgjosephlee opened on May 21, 2021

• Repeatedly choosing back-to-back single base indels when a match is expected

  jeffdaily/parasail-python#59 · Filter by author rsharris opened on Jan 30, 2021
  8

• Does any interface documentation exist, beyond that in the readme?

  jeffdaily/parasail-python#58 · Filter by author rsharris opened on Jan 28, 2021
  4

• Test failures on arm64

  jeffdaily/parasail-python#56 · Filter by author nileshpatra opened on Dec 6, 2020
  7

• Silent failure with nw_trace_scan_16 for larger sequences

  jeffdaily/parasail-python#46 · Filter by author ifiddes opened on Nov 7, 2019
  1

• Cigar format using ssw

  jeffdaily/parasail-python#45 · Filter by author rmcolq opened on Oct 28, 2019
  2

• Right Gaps, but not Left Gaps, Counting Toward nw_stat().length Attribute

  jeffdaily/parasail-python#42 · Filter by author kmayerb opened on Jul 3, 2019

• set version of C parasail library for build//install

  jeffdaily/parasail-python#41 · Filter by author EricDeveaud opened on Jul 1, 2019

• get alignment positions

  question
  jeffdaily/parasail-python#39 · Filter by author FlorianBrnrd opened on Jun 6, 2019
  4

• setup.py fails to find libparasail.so. Does not search LD_LIBRARY_PATH

  jeffdaily/parasail-python#36 · Filter by author fizwit opened on Mar 29, 2019
  1

• installation with conda

  jeffdaily/parasail-python#32 · Filter by author ksahlin opened on Jan 29, 2019
  10

• install failed with python 3.7 on MacOS (SSLCertVerificationError)

  jeffdaily/parasail-python#25 · Filter by author rderelle opened on Aug 21, 2018
  5

• trouble pip installing on os x

  jeffdaily/parasail-python#24 · Filter by author tlambert03 opened on Jul 28, 2018
  11

• better/automated testing

  jeffdaily/parasail-python#21 · Filter by author jeffdaily opened on Jan 18, 2018
  2