Issues

• Replace workflow-context action with GitHub's job context

  nextstrain/.github#167 · Filter by author joverlee521 opened on Apr 23, 2026

• Transient error in write-envdir

  bug
  nextstrain/.github#166 · Filter by author victorlin opened on Apr 6, 2026
  1

• pathogen-repo-ci: add tests for nextstrain run

  enhancement
  nextstrain/.github#159 · Filter by author joverlee521 opened on Jan 23, 2026
  2

• Add docs for workaround of testing new GH Actions

  documentation
  nextstrain/.github#145 · Filter by author joverlee521 opened on Oct 24, 2025

• pathogen-repo-build: Long runtimes for "Setup runtime docker"

  nextstrain/.github#144 · Filter by author joverlee521 opened on Oct 3, 2025

• actions/setup-nextstrain-cli: Add retry input

  enhancement
  nextstrain/.github#139 · Filter by author joverlee521 opened on Sep 2, 2025

• keep-workflows-enabled: query for scheduled GH Action workflows

  enhancement
  nextstrain/.github#119 · Filter by author joverlee521 opened on Nov 26, 2024

• Step conditions using !cancelled() need explict success check

  bug
  nextstrain/.github#117 · Filter by author genehack opened on Nov 22, 2024
  2

• pathogen-repo-ci: Add input for GH Action runner

  enhancement
  nextstrain/.github#103 · Filter by author joverlee521 opened on Jul 22, 2024
  2

  

• pathogen-repo-build: Generate a Snakemake report for workflow

  enhancement
  nextstrain/.github#100 · Filter by author joverlee521 opened on Jun 18, 2024
  6

• Use github.token for automated GitHub Releases

  nextstrain/.github#114 · Filter by author victorlin opened on Jan 16, 2024
  1

• ENH: Upload resulting auspice.jsons to nextstrain-staging for quicker inspection

  enhancement
  nextstrain/.github#36 · Filter by author corneliusroemer opened on Feb 6, 2023
  6