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@rendeirolab

Rendeiro Lab

Research group working on computational and molecular methods to study human aging and pathology

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  1. rendeirolab.github.io rendeirolab.github.io Public

    A simple static website for the Rendeiro lab

    Python

  2. lab-manual lab-manual Public

    The Rendeiro lab manual

    Shell 1 1

  3. LazySlide LazySlide Public

    Accessible and interoperable whole slide image analysis for digital pathology in Python

    Python 328 32

  4. wsidata wsidata Public

    Efficient data structures and IO for whole slide image analysis

    Python 33 6

  5. wsi wsi Public

    A Python package for the processing of whole slide histopathological images

    Python 6

  6. _project_template _project_template Public template

    A cookiecutter template for projects in the Rendeiro lab

    Python 1

Repositories

Showing 10 of 24 repositories
  • metpredict-website Public
    rendeirolab/metpredict-website's past year of commit activity
    HTML 0 1 0 0 Updated Oct 8, 2026
  • lazyslide-tutorials Public

    Tutorials for lazyslide in jupyter notebooks

    rendeirolab/lazyslide-tutorials's past year of commit activity
    Jupyter Notebook 3 MIT 1 0 0 Updated Oct 6, 2026
  • LazySlide Public

    Accessible and interoperable whole slide image analysis for digital pathology in Python

    rendeirolab/LazySlide's past year of commit activity
    Python 328 MIT 32 7 0 Updated Oct 6, 2026
  • lazyslide-models Public

    The model zoo for LazySlide

    rendeirolab/lazyslide-models's past year of commit activity
    Python 4 MIT 2 1 0 Updated Oct 6, 2026
  • wsidata Public

    Efficient data structures and IO for whole slide image analysis

    rendeirolab/wsidata's past year of commit activity
    Python 33 MIT 6 6 (1 issue needs help) 0 Updated Oct 1, 2026
  • rendeirolab.github.io Public

    A simple static website for the Rendeiro lab

    rendeirolab/rendeirolab.github.io's past year of commit activity
    Python 0 0 0 0 Updated Oct 1, 2026
  • lab-manual Public

    The Rendeiro lab manual

    rendeirolab/lab-manual's past year of commit activity
    Shell 1 1 0 1 Updated Sep 27, 2026
  • minibatch-dp-means Public

    Fast mini-batch DP-Means clustering with a C++ backend

    rendeirolab/minibatch-dp-means's past year of commit activity
    Python 0 0 0 0 Updated Sep 15, 2026
  • macsima-pipeline Public

    A python based preprocessing SLURM pipeline for MACSima data

    rendeirolab/macsima-pipeline's past year of commit activity
    Python 0 MIT 0 0 0 Updated Aug 13, 2026
  • stainx Public

    Enhanced stain normalization for histopathology images with batch processing support. Optimized for CPU, GPU (CUDA), and MPS (Apple Silicon) devices.

    rendeirolab/stainx's past year of commit activity
    Python 25 0 5 0 Updated Aug 9, 2026
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