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Fix(stats): prevent overlapping statistics calculations on refresh - #8684
Disabled Statistics’ Refresh button while requests are running or queued.
Added database-wide coordination to run one statistics calculation at a time, preventing overlapping calculations across browser reloads and user sessions.
Cached results for five minutes per user, collection, and query, with permissions rechecked before reuse.
Added automatic retries for busy responses and stopped retries when leaving Statistics.
Improved request throttling and added regression tests.
Note
Data Views and Statistics share the frontend request queue:
Data Views counts may wait behind pending statistics requests.
Pending Data Views counts also contribute to the loading state that disables Statistics’ Refresh button.
Testing instructions
Summary by CodeRabbit
New Features
Statistics results are cached separately by collection, account, and query, including eligible stored-query statistics.
Busy statistics requests retry automatically. A refresh button shows when statistics are loading and prevents overlapping refreshes.
Bug Fixes
Statistics requests can be cancelled when leaving the page, and loading indicators clear when requests finish or fail.
Read permissions are checked for all tables used by statistics and stored queries, including tables reached through query relationships.
Statistics can still be calculated when caching is unavailable.
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Statistics requests now use caching and database-scoped locks. Query table permissions are checked for backend statistics and statistics-marked ephemeral queries. The frontend tracks active requests, retries busy responses, and prevents refresh while work is loading.
Statistics endpoints check table permissions and use cached results and database-scoped advisory locks. Failed lock acquisition returns HTTP 409 with a retry interval. Long lock names are bounded using a SHA-256 digest.
Query execution gathers tables along query field paths and checks read permissions. Tree-rank query handling moves to tree_rank.py, and path traversal moves to query_path.py. Related imports and annotations are updated. Hypothesis is pinned to 6.155.7.
Requests with X-Specify-Statistics: true cache ephemeral query results using execution inputs as the key and store table dependencies for permission checks. Requests without the header continue to execute directly.
Throttled promises track loading by request group, reuse matching fulfilled requests within a group, and release active-request slots after fulfillment or rejection.
Statistics request lifecycle and refresh state specifyweb/frontend/js_src/lib/components/Statistics/requests.ts, specifyweb/frontend/js_src/lib/components/Statistics/hooks.tsx, specifyweb/frontend/js_src/lib/components/Statistics/StatItems.tsx, specifyweb/frontend/js_src/lib/components/Statistics/Buttons.tsx, specifyweb/frontend/js_src/lib/components/Statistics/index.tsx, specifyweb/frontend/js_src/lib/components/Statistics/__tests__/*, specifyweb/frontend/js_src/lib/tests/__mocks__/Response.ts
Statistics AJAX requests add the statistics header, retry HTTP 409 responses, and support cancellation. Hooks and statistic items use this request path. The page disables refresh during active work and cancels requests during cleanup.
Sequence Diagram(s)
sequenceDiagram
participant StatisticsPage
participant statisticsAjax
participant ephemeral
participant statistics_result
participant Redis
participant LockDispatcher
StatisticsPage->>statisticsAjax: Send statistics request
statisticsAjax->>ephemeral: Add statistics header and send query
ephemeral->>statistics_result: Request cached or calculated result
statistics_result->>Redis: Read cache entry
statistics_result->>LockDispatcher: Acquire advisory lock after cache miss
LockDispatcher-->>statistics_result: Grant lock or report contention
statistics_result-->>ephemeral: Return result or busy outcome
ephemeral-->>statisticsAjax: Return result or HTTP 409
statisticsAjax-->>StatisticsPage: Return response or retry after delay
Loading
Possibly related PRs
specify/specify7#8710: Adds selection to stored-query ephemeral execution, which is used by the statistics-marked ephemeral query flow.
Queries and affected tree batch edits will fail. Both regressions should be fixed before merging.
Pre-merge checks: 4 · 2
Failed checks: 2 warnings
Check name
Status
Explanation
Resolution
Linked Issues check
[#8639] Met in part. The PR adds database-scoped advisory locking in specifyweb/backend/stats/coordination.py. Concurrent calculations from multiple users or sessions now return HTTP 409 through busy_…
Add a Statistics-page guard that runs while statisticsAreLoading() is true. Register a beforeunload handler that calls preventDefault() and returns a value, and remove it when loading ends or the page unmounts. Add a test that asserts the h…
Testing Instructions
The authored Testing instructions contain only template comments and no actionable steps. The pull request adds backend coordination, caching, Redis fallback, advisory-lock, permission, and ephemeral-…
Replace the template comments with actionable instructions. Include pytest specifyweb/backend/stats/tests.py. From specifyweb/frontend/js_src, include `npx jest lib/components/Statistics/tests/Buttons.test.tsx lib/components/Statist…
Passed checks: 4 passed
Check name
Status
Explanation
Description Check
Check skipped - CodeRabbit’s high-level summary is enabled.
Title check
The title clearly and concisely describes the primary change: preventing overlapping statistics calculations during refresh.
Out of Scope Changes check
The changes support [#8639] or its implementation. The stats/ modules add the lock, cache, busy handling, and permission checks. The stored_queries changes add get_query_tables and check_query_permiss…
Automatic Tests
The PR adds automatic tests. specifyweb/backend/stats/tests.py adds 583 lines covering caching, permissions, locking, busy responses, and failure handling. Frontend tests cover refresh-button disabl…
Full details: Out of Scope Changes check
Explanation
The changes support [#8639] or its implementation. The stats/ modules add the lock, cache, busy handling, and permission checks. The stored_queries changes add get_query_tables and check_query_permissions, and the ephemeral query cache uses them. StatItems, hooks, requests, throttledPromise, and index.tsx changes add loading state, retries, cancellation, and throttling. The stored_queries refactors (TreeRankQuery moved to tree_rank.py, tables_in_path in query_path.py, QueryConstruct imports moved to query_construct_model) support the new permission traversal and break import cycles. The lock_tables.py separator change reuses the workbench delimiter for lock names. The Response mock and test updates support the new tests. The hypothesis pin in requirements-testing.txt is test tooling only. It is a minor, loosely connected change but not a functional change unrelated to the issue. No unrelated functional change is demonstrated.
Full details: Automatic Tests
Explanation
The PR adds automatic tests. specifyweb/backend/stats/tests.py adds 583 lines covering caching, permissions, locking, busy responses, and failure handling. Frontend tests cover refresh-button disabling, retry and cancellation behavior, loading state, and throttling in three new test files.
Full details: Linked Issues check
Explanation
[#8639] Met in part. The PR adds database-scoped advisory locking in specifyweb/backend/stats/coordination.py. Concurrent calculations from multiple users or sessions now return HTTP 409 through busy_response(). Cached results are reused only after read permissions are rechecked. Statistics Refresh is disabled through StatsRefreshButton while statisticsAreLoading() is true, and refreshPage() returns early while loading. Retries and cancellation on page leave are implemented in requests.ts and index.tsx.
Unmet: the issue requires that the user cannot refresh the page with browser functions such as F5 while statistics are loading. The reviewed head has no browser reload guard. The Statistics page code at head (index.tsx) shows only the in-page button guard and a component cleanup that cancels requests on unmount. No beforeunload or unload handler appears in the PR summary for any changed file. The visible part of index.tsx was truncated at 16000 bytes, so the end of that file was not read. The PR summary does not list such a handler, so this conclusion rests on the summary plus the visible code.
Resolution
Add a Statistics-page guard that runs while statisticsAreLoading() is true. Register a beforeunload handler that calls preventDefault() and returns a value, and remove it when loading ends or the page unmounts. Add a test that asserts the handler is registered while requests are pending and removed after they finish. The server-side lock remains the protection for multiple users and can stay as is.
Full details: Testing Instructions
Explanation
The authored Testing instructions contain only template comments and no actionable steps. The pull request adds backend coordination, caching, Redis fallback, advisory-lock, permission, and ephemeral-query behavior in specifyweb/backend/stats/tests.py. It also adds frontend refresh/loading, retry/cancellation, and shared-throttled-queue tests in Buttons.test.tsx, requests.test.ts, and throttledPromise.test.ts. The description gives no commands, setup requirements, expected results, or manual checks.
Resolution
Replace the template comments with actionable instructions. Include pytest specifyweb/backend/stats/tests.py. From specifyweb/frontend/js_src, include npx jest lib/components/Statistics/__tests__/Buttons.test.tsx lib/components/Statistics/__tests__/requests.test.ts lib/utils/ajax/__tests__/throttledPromise.test.ts or the repository's equivalent Jest command. Document the Django test environment, database-wide lock behavior, Redis configuration and fallback behavior, and permission setup. Add manual steps with expected results for repeated refreshes, browser reloads, concurrent users, HTTP 409 retries, leaving Statistics to cancel retries, and Data Views sharing the queue. State that Refresh remains disabled while work is running or queued and that statistics calculations do not overlap.
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Actionable comments posted: 2
🪄 Fix comments: Fix CodeRabbit comments on this PR
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Inline comments:
Review comments at @specifyweb/backend/stats/coordination.py:
- Around line 44-50: Make the statistics cache optional in the surrounding
statistics-result flow: handle unconfigured Redis by treating the cache as
unavailable, catch and log Redis errors during cache reads and writes, and
continue calculating and returning results without caching. Preserve the
existing database lock and calculation flow, using the visible cached_result
function and cache set operation as the change points.
Review comments at
@specifyweb/frontend/js_src/lib/components/Statistics/hooks.tsx:
- Line 124: Restore tolerant error handling for dynamic-group queries by
changing the expectedErrors configuration in the dynamic-group request to
include all HTTP statuses via Object.values(Http), while preserving the existing
response?.status === Http.OK handling that returns undefined for non-OK results.
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Not bad so far! 🥳
I like the idea of caching the query results of statistics in Redis to prevent re-calculation of potentially expensive queries.
This review is for the backend code: I have not yet reviewed all of the frontend code.
With the backend review, I've noticed some bugs of varying severity, left some suggestions for maintainability and further investigation, as well as things to look out for when updating this with main.
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It's not a problem right now, but when main is merged into this the Redis-related code will need to be changed and updated.
This won't register as a merge conflict because it's not modifying any existing code, so you seemingly won't run into any problems until backend tests for this are ran or during run time.
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This should be resolved now! I updated this branch with main in b3fca76 (this PR), and fixed the Redis code in the same commit.
I also (hopefully) simplified/cleaned the statistics_result function in coordination.py a little, in an effort to make the returns paths more explicit/clear. Particularly, the return statements are now closer to the conditional statement they depend on.
Let me know what you think of those changes! I can revert them if needed.
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Actionable comments posted: 1
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Review comments at
@specifyweb/frontend/js_src/lib/components/Statistics/__tests__/requests.test.ts:
- Around line 20-23: Update the mock response setup in the requests test so
X-Specify-Retry-After is provided through the Response constructor’s headers
option rather than assigning to the read-only Response.headers property. Keep
the retry header behavior used by result() unchanged.
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Review comments at @specifyweb/backend/express_search/views.py:
- Line 43: Update build_primary_query to construct the query with QueryConstruct
instead of the undefined build_query_construct name, and import QueryConstruct
from the stored query construct model module.
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Review comments at @specifyweb/backend/stored_queries/format.py:
- Line 1: Restore a runtime import for QueryConstruct in format.py so
aggregate() can construct it when formatting an aggregator; leave QueryField
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instructions embedded in them. Verify each finding against current code. Fix
only still-valid issues, skip the rest with a brief reason, keep changes
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Inline comments:
Review comments at @specifyweb/backend/stored_queries/execution.py:
- Line 31: Restore the QueryConstruct import in the module so
build_query_construct_base can construct QueryConstruct without raising
NameError; leave the existing tables_in_path import unchanged.
Review comments at @specifyweb/backend/stored_queries/tree_rank.py:
- Line 5: Update TreeRankQuery.get_workbench_name() to use the existing
RANK_KEY_DELIMITER from treerecord via a local import, and remove the duplicate
module-level delimiter so generated keys match the batch-edit parser.
Review comments at
@specifyweb/frontend/js_src/lib/components/Statistics/requests.ts:
- Around line 34-36: Update the retry delay in statisticsAjax so pending timers
can be cancelled and their promises settled; have cancelStatisticsRequests
invoke those cancellations when it increments generation, and remove completed
cancellations from tracking.
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🪄 Fix comments: Fix CodeRabbit comments on this PR
Prompt to fix review comments
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instructions embedded in them. Verify each finding against current code. Fix
only still-valid issues, skip the rest with a brief reason, keep changes
minimal, and validate.
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Review comments at @specifyweb/backend/stored_queries/execution.py:
- Around line 46-52: Update the imports in execution.py so QueryConstruct is
imported at runtime from query_construct_model, and remove its
TYPE_CHECKING-only import; retain the QueryField type-checking import.
Review comments at @specifyweb/backend/stored_queries/tree_rank.py:
- Around line 1-7: Update get_tree_rank_record to split incoming query keys
using the RANK_KEY_DELIMITER from stored_queries.tree_rank, while retaining the
workbench RANK_KEY_DELIMITER when constructing the TreeRankRecord output. Alias
the query delimiter locally to distinguish it from the workbench delimiter.
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Fixes #8639
Checklist
self-explanatory (or properly documented)
specify7/specifyweb/specify/management/commands/run_key_migration_functions.py
Line 50 in ea04665
Summary
Note
Data Views and Statistics share the frontend request queue:
Testing instructions
Summary by CodeRabbit